I was able to talk to IBM's support line to answer my question. Basically the V5R2 is more sensitive about the paper size specified. While previously 66L by 132W worked fine now I need to use 68L by 146W with CPI of 13.3 and LPI of 8. For queries we changed the file QPQUPRFIL in QSYS to reflect our desired default settings, and we use the OVRPRTF command before the RUNQRY statement in any CL programs we use to print queries. The OVRPRTF statement either use the parameters we established in the print file of IP10CPI OVRPRTF FILE(QPQUPRFIL) TOFILE(QUSRSYS/IP10CPI) OVRSCOPE(*JOB) or we specify each variable within the OVRPRTF command. I hope this helps someone else save a few hours of research.
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